We offer the following services in serum 2D DIGE:
A. Improved Serum 2D DIGE without Immuno-depletion
B. Immuno-depletion of Serum Abundant Proteins
A.
Improved Serum 2D DIGE Without Immuno-depletion
Applied Biomics has developed a protocol that significantly
improves the performance of standard protocol. For details
please click here to see
our paper
published on Genetic Engineering & Technology News.
Please see below for examples using ABO (Applied Biomics)
improved serum
2D DIGE protocol.
* Example 1: Human Serum Sample:
significantly more protein spots can be profiled by ABO
protocol.
|
Standard 2D protocol (pH3-10)
|
ABO pH3-10 protocol
|
ABO pH4-7 protocol
|
|
|
|
|
*
Example
2: Analysis of Preclinical Trial Mouse Serum Before
and After Drug Feeding Using
ABO Protocol. Four paired mouse
serum samples were collected before and after 4 different
treatments, then each paired samples were analyzed by 2D
DIGE using pH3-10
nonlinear IPG strip. The overlay images showed the difference
between the serum samples collected before (in green
color) and after (in red
color) the drug feeding (18 hours). In the image
overlay, the circled spots (in red)
indicated a protein with increased abundance due to drug
feeding. The 3-D view of the same spot is generated by DeCyder
software.

B. Immuno-depletion Of Serum Abundant Proteins For 2D DIGE
The
Challenge of Biomarker Discovery from Plasma/Serum
Transferrin: 76 kDa
Fibrinogen: 65 kDa (a), 51 kDa (g)
a1-antitrypsin: 56 kDa
IgG: 150 kDa
HSA: 67 kDa
IgA: 180 kDa
IgM: 750 kDa
Transferrin: 79 kDa
a2-Macroglobulin: 160 kDa
Haptoglobin: 43 kDa
alpha 1-acid glycoprotein: 23 kDa
APO A-I, APO A-II: 23 kDa
|
|
Protein dynamic range: 10 magnitude of difference in
amount |
|