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| 2D
DIGE Global Protein Expression Profiling Analytical Gel |
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price
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Code
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Price
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| 2D DIGE Analytical Gel (2 CyDye labeling) |
101A2
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$1200
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101N2
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$1500
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| 2D
DIGE Analytical Gel (3 CyDye labeling) |
101A3
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$1295
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101N3
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$1595
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Price includes:
1) experimental design
2) customized sample preparation and protein concentration
determination (2 samples for 2 CyDye labeling;3 samples for
3 CyDye labeling)
3) fluorescence dye labeling using CyDye
4) 1st dimension IEF and 2nd dimension SDS-PAGE
5) gel image scan using Typhoon scanner
6) In-gel analysis: Image analysis (ImageQuant)
& Quantitative analysis of up to 30 spots (DeCyder)
7) Cross-gel analysis: Image analysis (ImageQuant) & Quantitative
analysis of up to 30 spots, 2 comparisons for every 3 gels
(DeCyder)
Data will be presented as following
1) ImageQuant analysis: Gel images of individual samples and
overlay of two sample images (see
an example)
2) DeCyder Analysis: Quantitative analysis and comparison
of protein spots between different samples (see
an example)
Price does NOT cover:
1) Manual matching spots between different gels
2) Screen shots of 3D view of each spot
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2D
DIGE & Phospho-Protein Expression Profiling Analytical
Gel
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price
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Code
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Price
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| 2D DIGE & Phospho-Protein Profiling |
401A-PP1
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$1500
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401N-PP1
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$1800
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| Total Protein
versus Phospho-Protein on 2D Image |
401A-PP2
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$1500
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401N-PP2
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$1800
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| Phospho-Protein Enrichment (from
5mg) |
405A
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$700
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405N
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$1000
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2D
DIGE & Glyco-Protein Expression Profiling Analytical Gel
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price
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Code
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Price
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| 2D DIGE & Glyco-Protein Profiling |
420A-GP1
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$1500
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420N-GP1
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$1800
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| Total Protein versus Glyco-Protein
on 2D Image |
420A-GP2
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$1500
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420N-GP2
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$1800
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| 2D
DIGE Preparative Gel and Protein ID By Mass Spectrometry |
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price
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Code
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Price
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| 2D DIGE Preparative Gel (2 CyDye
labeling) |
102A2
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$1200
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102N2
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$1500
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| 2D
DIGE Preparative Gel (3 CyDye labeling) |
102A3
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$1295
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102N3
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$1595
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Spot Picking: up to 96 spots per gel
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103
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$200
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103
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$200
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Protein ID by Mass Spectrometry (MALDI-TOF/TOF)
1
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104A
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$115 per spot
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104N
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$135 per spot
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| Pathways Analysis
After Protein ID 2 |
203A
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call for a quote
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203N
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call for a quote
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1. Prices discounted and only apply for customers doing
2D DIGE service with Applied Biomics. Turnaround time starting
from Preparative gel to sending protein ID report is 7-10
business days. We offer high sensitivity protein identification
from gel spots or bands using the latest technologies in mass
spectrometry. In each run, four sensitivity standards in the
amount of 1-10 femtomole are included. Our sensitivity is
the range of 1-2 femtomole. Please see procedure
of protein ID for detailed steps of this service. Price
covers the following:
1) Gel treatment
2) In-gel trypsin digestion
3) Peptide extraction
4) Desalting
5) Spotting
6) MALDI-TOF
7) MALDI-TOF/TOF
8) Database search against NCBI database using MASCOT
9) Data report (see
an example)
2. Pathway Analysis Service is
provided only for customers doing the 2D DIGE and Protein
ID services with Applied Biomics. The report will include
the major pathway list with the following information:
1) Functional groups
2) Genes in each functional group
3) Enrichment score
4) P value and FDR
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| Standard
2D Gels with Different Staining |
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price
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Code
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Price
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2D gel with 1 CyDye Labeling
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401A
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$800
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401N
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$960
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2D gel with Coomassie Blue staining
and
image scan
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402A
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$600
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402N
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$800
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| 2D gel with Sypro Ruby staining
and image scan |
403A
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$700
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403N
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$900
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2D gel with Deep Purple staining
and image scan
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404A
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$700
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404N
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$900
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| 2D gel with Lumitein staining and
image scan |
405A
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$600
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405N
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$800
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*Sypro Ruby is a trademark of Invitrogen.
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price
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Code
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Price
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| 2D gel with 1 CyDye Labeling |
401A
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$800
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401N
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$960
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2D DIGE gel with 2 CyDye labeling
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101A2
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$1200
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101N2
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1500
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Transfer to PVDF or Nitrocellulose membrane 1
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520A
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$240
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520N
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$280
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| Western Blot with one color
2 |
512A
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$400
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512N
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$480
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| Western Blot with two color 2 |
513A
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$600
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513N
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$720
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The following PTM primary antibodies are covered by Applied
Biomics for the PTM-Western blot:
Anti-pTyr
Anti-pThr
Anti-pSer
Anti-Ubiquitin
Anti-Acetylated-Lysine
Anti-Sulfo-Tyrosine
Anti-Methyl-Arginine
Anti-Nitrotyrosine
Anti-Biotin
Customers are responsible for providing the other primary
antibodies not listed above.
All the fluorescent labeled secondary antibodies are provided
by Applied Biomics.
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1. Price includes:
1)Trans-blotting 2D Gel to PVDF or Nitrocellulose membrane
2) Membrane images scanned after the transfer (see
an example)
2. Price includes
3) Western blot using the primary antibodies provided by
customers, Applied Biomics will provide secondary antibodies
4) Membrane images scanned after Western Blot (see
an example)
Price does NOT cover the Primary antibodies
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| 1D
Western Blot (no Cydye labeling) |
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price
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Code
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Price
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| 1D gel with no CyDye labeling /
up to 14 samples 1 |
417A
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$450
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417N
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$540
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1D gel with 1 CyDye labeling / up to 14
samples 1
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418A
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$500
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418N
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$600
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Transfer to PVDF or Nitrocellulose membrane 2
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520A
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$240
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520N
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$280
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| Western Blot with one color
3 |
512A
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$400
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512N
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$480
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| Western Blot with two color 3 |
513A
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$600
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513N
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$720
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| Customers are
responsible for the primary antibodies, please call Tech Support
to discuss details |
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1. Price does NOT cover sample preparation
2. Price includes:
1)Trans-blotting 2D Gel to PVDF or Nitrocellulose membrane
2) Membrane images scanned after the transfer
3. Price includes:
1) Western blot using the primary antibodies provided by
customers, Applied Biomics will provide secondary antibodies
2) Membrane images scanned after Western Blot
Price does NOT cover the Primary antibodies
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
|
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Code
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Price
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Code
|
Price
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| 1D DIGE gel with 2 CyDye labeling
* |
111A2
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$600
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111N2
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$720
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| 1D
DIGE gel with 3 CyDye labeling * |
112A3
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$700
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112N3
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$840
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* Price includes:
1) 1D Gel, up to 14 samples plus one lane for protein marker
2) 1D image scan and data report
Price does NOT cover sample preparation.
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| Mass
Spectrometry Services |
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price/each sample
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Code
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Price/each
sample
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Protein ID by MALDI-TOF/TOF for DIGE
customers 1
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104A
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$115/sample
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104N
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$135/sample
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Protein ID by MALDI-TOF/TOF for External
customers
(10 or less samples) 1
|
305A
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$150/sample
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305N
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$180/sample
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Protein ID by
MALDI-TOF/TOF for External customers
( more than 10 samples) 1
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305A
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$135/sample
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305N
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$160/sample
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LC-MS/MS on low complexity samples
(1D Gel band, 2 or less samples)
2
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331A
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$450/sample
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331N
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$540/sample
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LC-MS/MS
on low complexity samples
(1D Gel band, more than 2 samples) 2
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331A
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$350/sample
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331N
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$420/sample
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LC-MS/MS on moderate complexity samples
2
|
332A
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call for price
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332N
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call for price
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| LC-MS/MS on high
complexity samples 2 |
333A
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call for price
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333N
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call for price
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Phospho-peptide Enrichment
|
321A
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$150
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321N
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$180
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| Identification
of Phosphorylation-site 3 |
322A
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$375
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322N
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$450
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De
Novo Peptide Sequencing
|
340A
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call for price
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340N
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call for price
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1. Turnaround time is 2-5 business
days. Please see procedure
of protein ID for detailed steps of this service. Price
covers the following:
1) Gel treatment
2) In-gel trypsin digestion
3) Peptide extraction
4) Desalting
5) Spotting
6) MALDI-TOF
7) MALDI-TOF/TOF
8) Standard database search against NCBI database using MASCOT
9) Data report (see
an example)
2. Turnaround time is 5-7 business
days for >=3 samples, and up to 10 business days for <=2
samples. Please see procedure
of LC-MS/MS for detailed steps of this service.
Low complexity samples: 1D gel band - Each sample should
contain only one gel piece with one protein band, no bigger
than 1x1x2mm in size. Samples with more than one gel piece,
and/or more than one protein band will be considered as moderate
to high complex samples. We recommend you cut out only the
area with your protein of interest (1x1x2mm size) and follow
these guidelines
to prepare samples
Moderate complexity samples: protein mixture such as
IP or column purified sample, <50 proteins
High complexity samples: more than 50 protein mix
Price covers the following:
1) Nano-LC coupled with auto-spotting
2) MS/MS
3) Standard database search against NCBI database using MASCOT
4) Data report (see
an example)
Price does NOT cover: 1) sample preparation; 2) data request
in addition to the standard report.
3. Turnaround time is 5-7 business
days. Please see the procedure
of Identify Phospho-site for detailed steps of this service.
Price covers the following:
1) Reduction and alkylation
2) Trypsin digestion
3) Peptide extraction
4) Desalting
5) Phospho-peptide enrichment (if you order item # 321)
6) MALDI-TOF
7) MALDI-TOF/TOF on peptides matching the mass of phosphophorylated
peptides from virtual digest
8) Database search against NCBI database using MASCOT
9) Data report: 1) top 10 hits via MASCOT search; 2) list
of precursors with predicated phosphorylation sites; 3) MSMS
spectrums on precursors showing loss of phosphate
Price does NOT cover: 1) sample preparation; 2) data request
in addition to the standard report.
If customer does not provide protein sequence or accession
number, an additional $150 will be charged for protein identification.
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price/each sample
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Code
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Price/each
sample
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iTRAQ® Experiment
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350A
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call for price
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350N
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call for price
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1. Turnaround time is 5-7 business days. Please see the procedure
of iTRAQ® experiment for detailed steps of this service.
Price covers the following:
1) Reduction and alkylation
2) Trypsin digestion
3) iTRAQ labeling followed by sample cleaning up
4) Nano-LC coupled with auto-spotting
5) MS and MS/MS
6) Standard database search against NCBI database using MASCOT
7) Data report
Price does NOT cover sample preparation.
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| Serum
Protein Immuno-Depletion |
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Services Description
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Academic/Governmental
Labs
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Industrial/Commercial
Labs
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Code
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Price
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Code
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Price
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Standard sample preparation for 2D DIGE from cell pellet,
tissue, or protein precipitate.
Includes solubilization in lysis buffer
and protein determination.
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No charge
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No charge
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Major Protein Removal
from Human Serum, Plasma, CSF, and Urine
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601A
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call for price
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601N
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call for price
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IgY-12 immuno-depletion(Human 20 - 50 ul)
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436A-12
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call for price
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436N-12
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call for price
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IgY-M7 immuno-depletion (Mouse 20 25
ul)
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436A-M7
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call for price
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436N-M7
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call for price
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IgY-R7 immuno-depletion(Rat 20 35 ul)
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436A-R7
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call for price
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436N-R7
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call for price
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IgY-12: against the 12 most abundant human plasma proteins:
Human Serum Albumin, IgG, Fibrinogen, Transferrin, IgA, IgM,
Haptoglobin, a2-Macroglobulin, a1-Acid Glycoprotein, a1-Antitrypsin
and HDL (Apo A-I & Apo A-II).
IgY-M7: against the 7 most abundant rodent (mouse) plasma
proteins: Mouse Serum Albumin, IgG, Fibrinogen, Transferrin,
a1-antitrypsin, Haptoglobin & IgM.
IgY-R7: against the 7 most abundant rodent (rat or mouse)
plasma proteins: Rat Serum Albumin, IgG, Fibrinogen, Transferrin,
a1-antitrypsin, Haptoglobin & IgM.
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Services Description
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Academic/Governmental
Labs
|
Industrial/Commercial
Labs
|
|
Code
|
Price
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Code
|
Price
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| Additional
data analysis (per hour) |
202A
|
$100
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202N
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$120
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| Consulting
Service (per hour) |
201A
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$100
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201N
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$200
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| Computerized 2D Gel Comparisons
(2 gels) |
801A
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$450
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801N
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$550
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Each additional
gel
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802A
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$200
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802N
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$250
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This analysis is for comparison of multiple
scanned 2-D gel images. Requires the scanned gel images
of previously run 2- D gels.
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| Biological Sample Storage |
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First 6 months
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No Charge
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No Charge
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Additional 6 month periods
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701A
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$125
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701N
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$150
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Additional 12month periods
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702A
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$200
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702N
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$250
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| Electronic
Data Storage(scans, images, etc.) |
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First 120 days
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No Charge
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No Charge
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On-file status for later retreival
|
703A
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$125
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703N
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$150
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Back To Top
Customized
and Contract Research
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Whether you are an individual researcher, a university lab,
or a commercial enterprise, Applied Biomics can help you to
design a research program that will fit your laboratory's
needs. For more information about our customization services
and contract services, please contact us.
E-mail: support@appliedbiomics.com
Tel: 1-510-887-0889
Fax: 1-510-887-0867
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