|
|
|
Selected
Publications
|
Sample Type
|
|
|
|
1.
Kalupahana, N.S., Massiera, F., Quignard-Boulange, A.,
Ailhaud, G., Voy, B.H., Wasserman, D.H. and Moustaid-Moussa,
N. (2012) Overproduction of Angiotensinogen From
Adipose Tissue Induces Adipose Inflammation, Glucose Intolerance,
and Insulin Resistance. Obesity. 20: 48-56.
|
Mouse tissue
|
| 2.
Zhang, H.H., Feng, L., Wang, W., Magness, R.R. and Chen,
D.B. (2012) Estrogen-responsive nitroso-proteome
in uterine artery endothelial cells: Role of endothelial
nitric oxide synthase and estrogen receptor-ß .
Journal of Cellular Phyisiology. 227: 146-159. |
Human cell line
|
3.
Yang Y, Primrose DA, Leung AC, Fitzsimmons RB, McDermand
MC, Missellbrook A, Haskins J, Smylie AS, Hughes SC. (2012)
The PP1 phosphatase Flapwing regulates the activity of
Merlin and Moesin in Drosophila. Developmental
Biology 361: 412-426.
|
Drosophila |
4.
Kohlgraf KG, Ackermann AR, Burnell KK, Srikantha RN, Joly
SA, Bartlett JA, Gakhar L, Johnson GK, McCray PB Jr, Guthmiller
JM, Brogden KA (2012) Quantitation of SPLUNC1 in
saliva with an xMAP particle-based antibody capture and
detection immunoassay. Archives of Oral Biology
57: 197-204.
|
Human saliva |
5.
Ramsey, A.J., Milenkovic, M., Oliveira, A.F., Escobedo-Lozoya,
Y., Seshadri, S,, Salahpour, A., Sawa, A., Yasuda, R.,
Caron, M.G. (2011) Impaired NMDA receptor transmission
alters striatal synapses and DISC1 protein in an age-dependent
manner. PNAS USA. 108(14):5795-5800.
|
Mouse tissue
|
| 6.
Huang Z, Hoffmann FKW, Norton RL, Hashimoto AC and Hoffmann
PR (2011) Selenoprotein k is a novel target of
m-calpain and cleavage is regulated by toll-like receptor-induced
calpastatin in macrophages. JBC 286: 34830-34838. |
Cells
|
| 7.
Hong-hai Zhang, Yu-ping Wang, Dong-bao Chen (2011)
Analysis of nitroso-Proteomes in Normotensive and Severe
Preeclamptic Human Placentas. Biol Reprod. 84:
966-975. |
Human placentas
|
8.
Kassa, R.M., Kasensa, N.L., Monterroso, V.H., Kayton,
R.J., Klimek, J.E., David, L.L., Lunganza, K.R., Kayembe,
K.T., Bentivoglio, M., Juliano, S.L. and Tshala-Katumbay,
D.D. (2011) On the biomarkers and mechanisms of
konzo,
a distinct upper motor neuron disease associated with
food (cassava) cyanogenic exposure. Food Chem Toxicol.
49:571-578. |
Neuron cells
|
| 9.
Froman DP, Feltmann AJ, Pendarvis K, Cooksey AM, Burgess
SC, Rhoads DD. (2011) A proteome-based model for
sperm mobility phenotype. J. Anim Sci. 89:1330-1337. |
Sperm cells
|
10.
Hill, D., Coss, C., Dubey, J.P., Wroblewski, K., Sautter,
M., Hosten, T., Munoz-Zanzi, C., Mui, E., Withers, S.,
Boyer, K., Hermes, G., Coyne, J., Jagdis, F., Burnett,
A., McLeod, P., Morton, H., Robinson, D., McLeod, R. and
Toxoplasmosis Study Group (2011) Identification
of a sporozoite-specific antigen from toxoplasma gondii.
Journal of Parasitology 97:328-337.
|
Toxoplasma gondii
|
|
11. Antunes, R.F., Brandão,
C., Maia, M., Arosa, F.A. (2011) Red blood cells
release factors with growth and survival bioactivities
for normal and leukemic t cells. Immunology and Cell
Biology 89: 111-121.
|
Red blood cells
|
|
12. Huang N.F., Kurpinski, K.,
Qizhi Fang, Q.Z., Lee, R.J. and Li, S. (2011)
Proteomic identification of biomarkers of vascular injury.
Am J Transl Res 3:139-148.
|
Rat plasma
|
| 13.
Marshall, J.L., Huestis, D.L., Garcia, C., Hiromasa, Y.,
Wheeler, S., Noh, S., Tomich, J.M., Howard, D.J. (2011)
Comparative proteomics uncovers the signature of natural
selection acting on the ejaculate proteomes of two cricket
species isolated by postmating, prezygotic phenotypes.
Mol Biol Evol 28: 423-435. |
Cricket
|
| 14.
Kirpich, I.A., Gobejishvili, L.N., Homme, M.B., Waigel,
S., Cave, M., Arteel, G., Barve, S.S., McClain, C.J. and
Deaciuc, I.V. (2011) Integrated hepatic transcriptome
and proteome analysis of mice with high-fat diet-induced
nonalcoholic fatty liver disease. The Journal of Nutritional
Biochemistry 22: 38-45. |
Mouse liver tissue
|
|
15. Posokhova, E., Song, H.,
Belcastro, M., LeeAnn Higgins, LA., Bigley, L.R., Michaud,
N.A., Martemyanov, K.A. and Sokolov, M. (2011)
Disruption of the Chaperonin Containing TCP-1 Function
Affects Protein Networks Essential for Rod Outer Segment
Morphogenesis and Survival Molecular and Cellular
Proteomics 10: M110.000570.
|
Retina
|
|
16. Thakkar, D., Shervington,
L. and Shervington, A. (2011) Proteomic Studies
Coupled with RNAi Methodologies can Shed Further Light
on the Downstream Effects of Telomerase in Glioma. Cancer
Investigation 29: 113-122.
|
Glioma cells
|
| 17.
Arce-Paredes, P., Mora-Escobedo, R., Luna-Arias, J.P.,
Mendoza-Hernández, G. and Rojas-Espinosa, O. (2011)
Heat, Salinity, and Acidity, Commonly Upregulate A1aB1b
Proglycinin in Soybean Embryonic Axes. Soybean - Biochemistry,
Chemistry and Physiology pp402-422. |
Plant
|
| 18.
Green, K.N., Khashwji, H., Estrada, T., Laferla, F,M.
(2011) ST101 induces a novel 17kDa APP cleavage
that precludes A generation in vivo. Ann Neurol.
69 (5): 831-844. |
Mouse tissue
|
19.
Maldonado, R., Wei, R., Kachlany, S.C., Kazi, M. and Balashova,
N.V. (2011) Cytotoxic effects of Kingella kingae
outer membrane vesicles on human cells. Microbial Pathogenesis
51: 22-30.
|
Human cells
|
| 20.
Mains, L.M., Christenson, L., Yang, B., Sparks, A.E.,
Mathur, S., Van Voorhis, B.J. (2011) Identification
of apolipoprotein A1 in the human embryonic secretome.
Fertil Steril. 96:422-427. |
Human blastocysts
|
| 21.
Chae, H.S. and Kim, Y.H. (2011) A NELL-1 Binding
Protein: Vimentin. J. Kor Dent Sci. 4: 6 - 13 |
C. elegans
|
| 22.
Sindhu Saraswathy, Narsing A. Rao (2011) Posttranslational
modification of differentially expressed mitochondrial
proteins in the retina during early experimental autoimmune
uveitis. Molecular Vision 17:1814-1821. |
Mouse mitochondria |
23.
Powolny, A.A., Bommareddy, A., Hahm, E.R., Normolle, D.P.,
Beumer, J.H., Nelson, J.B., Singh, S.V. (2011)
Chemopreventative Potential of the Cruciferous Vegetable
Constituent Phenethyl Isothiocyanate in a Mouse Model
of Prostate Cancer. J Natl Cancer Inst. 103: 571-584.
|
Mouse
tissue |
24.
Ji, C., Kaplowitz, N., Lau, M.Y., Kao, E., Petrovic, L.M.,
Lee, A.S. (2011) Liver-specific loss of GRP78 perturbs
globally unfolded protein response and exacerbates a spectrum
of acute and chronic liver diseases. Hepatology
54: 229-239.
|
Mouse liver |
| 25.
Gong KZ, Xing DQ, Li P, Hilgers RH, Hage FG, Oparil S
and Chen YF (2011) cGMP Inhibits TGF-ß Signaling
by Sequestering Smad3 with Cytosolic ß2-Tubulin
in Pulmonary Artery Smooth Muscle Cells. Molecular
Endocrinology 25: 1794-1803 |
Cells |
| 26.
Oggé G, Romero R, Lee DC, Gotsch F, Than NG, Lee
J, Chaiworapongsa T, Dong Z, Mittal P, Hassan SS, Kim
CJ. (2011) Chronic chorioamnionitis displays distinct
alterations of the amniotic fluid proteome. J Pathology
223(4):553-65. |
Amniotic
fluid |
| 27.
Wang J, Han X, Saha S, Xu T, Rai R, Zhang F, Wolf YI,
Wolfson A, Yates JR, Kashina A. (2011) Arginyltransferase
is an ATP-independent self-regulating enzyme that forms
distinct functional complexes in vivo. Chem Biol.
18:121-30. |
Cells |
| 28.
Maldonado R, Wei R, Kachlany SC, Kazi M, Balashova NV
(2011) Cytotoxic effects of Kingella kingae outer
membrane vesicles on human cells. Microbial Pathogenesis
51: 22-30. |
Cells |
| 29.
Patrick S. Hopf, Rachel S. Ford, Najwa Zebian, Alexandra
Merkx-Jacques, Somalinga Vijayakumar, Dinath Ratnayake,
Jacqueline Hayworth, Carole Creuzenet (2011) Protein
Glycosylation in Helicobacter pylori: Beyond the Flagellins?
PLoS ONE 6(9): e25722. doi:10.1371/journal.pone.0025722 |
Cells |
| 30.
Bryant KG, Camacho J, Jasmin JF, Wang CG, Addya A, Casimiro
MC, Fortina P, Balasubramaniam S, Knudsen KE, Schwarting
R, Lisanti MP and Mercier I (2011) Caveolin-1 overexpression
enhances androgen-dependent growth and proliferation in
the mouse prostate. The International Journal of Biochemistry
& Cell Biology, 43:1318-1329. |
Mouse prostate |
| 31.
Boone LR, Lagor WR, de la Llera Moya M, Niesen MI, Rothblat
GH, Ness GC (2011) Thyroid hormone enhances the
ability of serum to accept cellular cholesterol via the
ABCA1 transporter. Atherosclerosis, 218: 77-82. |
Rat
serum |
| 32.
Xi, L., Zhu, S.G., Hobbs, D.C., Kukreja, R.C. (2011)
Identification of protein targets underlying dietary nitrate-induced
protection against doxorubicin ardiotoxicity. Journal
of Cellular and Molecular Medicine 15: 2512-2524. |
Mouse heart
tissue |
| 33.
Trimmer, C., Sotgia, F., Whitaker-Menezes, D., Balliet,
R.M., Eaton, G., Martinez-Outschoorn, U.E., Pavlides,
S., Howell, A., Iozzo, R.V., Pestell, R.G., Scherer, P.E.,
Capozza, F. and Lisanti M.P. (2011) Caveolin-1
and mitochondrial SOD2 (MnSOD) function as tumor suppressors
in the stromal microenvironment. Cancer Biology &
Therapy 11: 383-394. |
Human
cell line |
| 34.
Chen Y, Wang D, Guo Z, Zhao J, Wu B, Deng H, Zhou T, Xiang
H, Gao F, Yu X, Liao J, Ward T, Xia P, Emenari C, Ding
X, Thompson W, Ma K, Zhu J, Aikhionbare F, Dou K, Cheng
SY, Yao X. (2011) Rho kinase phosphorylation promotes
ezrin mediated metastasis in hepatocellular carcinoma.
Cancer Res. 71: 1721-1729. |
Human cells |
35.
Miharada K, Karlsson G, Rehn M, Rörby E, Siva K,
Cammenga J, Karlsson S. (2011) Cripto Regulates
Hematopoietic Stem Cells as a Hypoxic-Niche-Related Factor
through Cell Surface Receptor GRP78. Cell Stem Cell
9: 330-344.
|
Stem
cell |
36.
Castello-Cros R, Bonuccelli G, Molchansky A, Capozza F,
Witkiewicz AK, Birbe RC, Howell A, Pestell RG, Whitaker-Menezes
D, Sotgia F, Lisanti MP (2011) Matrix remodeling
stimulates stromal autophagy, "fueling" cancer
cell mitochondrial metabolism and metastasis. Cell
Cycle 10:2021-2034.
|
Human cell
line |
| 37.
Kalupahana NS, Claycombe KJ and Moustaid-Moussa N. (2011)
(n-3) fatty acids alleviate adipose tissue inflammation
and insulin resistance: mechanistic insights. Advances
in Nutrition 2: 304-316. |
Mouse
tissue |
| 38.
Chiavarina B, Whitaker-Menezes D, Migneco G, Martinez-Outschoorn
UE, Pavlides S, Howell A, Tanowitz HB, Casimiro MC, Wang
CG, Pestell RG, Grieshaber P, Caro J., Sotgia F and Lisanti
MP (2010) HIF1-alpha functions as a tumor promoter
in cancer-associated fibroblasts, and as a tumor suppressor
in breast cancer cells: Autophagy drives compartment-specific
oncogenesis. Cell Cycle 9:3534-3551. |
Human cell
line |
39.
Bonuccelli G, Whitaker-Menezes D, Castello-Cros R, Pavlides
S, Pestell RG, Fatatis A, Witkiewicz AK, Vander Heiden
MG, Migneco G, Chiavarina B, Frank PG, Capozza F, Flomenberg
N, Martinez-Outschoorn UE, Sotgia F, Lisanti MP. (2010)
The reverse Warburg effect: glycolysis inhibitors prevent
the tumor promoting effects of caveolin-1 deficient cancer
associated fibroblasts. Cell Cycle 9:1960-1971.
|
Human
cell line |
40.
Migneco G, Whitaker-Menezes D, Chiavarina B, Castello-Cros
R, Pavlides S, Pestell RG, Fatatis A, Flomenberg N, Tsirigos
A, Howell A, Martinez-Outschoorn UE, Sotgia F, Lisanti
MP. (2010) Glycolytic cancer associated fibroblasts
promote breast cancer tumor growth, without a measurable
increase in angiogenesis-Evidence for stromal-epithelial
metabolic coupling. Cell Cycle 9: 2412-2422.
|
Human cells |
| 41.
Birk. E. et. al. (2010) SOBP Is Mutated in Syndromic
and Nonsyndromic Intellectual Disability and Is Highly
Expressed in the Brain Limbic System. The American
Journal of Human Genetics 87: 694-700. |
Mouse
brain |
42.
Prescott, M.A. and Pastey, M.K. (2010) Identification
of Unique Blood and Urine Biomarkers in Influenza Virus
and Staphylococcus aureus Co-infection: A Preliminary
Study. Biomarker Insights 5: 145-151.
|
Mouse urine
|
|
43. Balestrieri, M.L., Giovane,
A., Milone, L., Felice, F., Fiorito, C., Crudele, V.,
Esposito, A., Rossiello, R., Minucci, P.B., Farzati,
B., Servillo, L. and Napoli, C. (2010) Modification
of the detrimental effect of TNF-? on human endothelial
progenitor cells by fasudil and Y27632. Journal of
Biochemical and Molecular Toxicology 24: 351-360.
|
Human endothelial progenitor cells
|
|
44. Paczkowski, M. and Krisher,
R. (2010) Aberrant protein expression is associated
with decreased developmental potential in porcine cumulus-oocyte
complexes. Molecular Reproduction and Development.
77: 51 -58.
|
Porcine cumulus-oocyte complexes
|
|
45. Rex, E.B., Rankin, M.L.,
Yang, Y., Lu, Q, Gerfen, C.R., Jose, P.A., and Sibley,
D.R. (2010) Identification of RanBP 9/10 as Interacting
Partners for Protein Kinase C / and the D1 Dopamine
Receptor: regulation of PKC-mediated receptor Phosphorylation.
Molecular Pharmacology 78: 69-80.
|
HEK293T cells
|
|
46. Kongara, S., Kravchuk, O.,
Teplova, I., Lozy, F., Schulte, J., Moore, D., Barnard,
N., Neumann, C.A., White, E., Karantza, V. (2010)
Autophagy regulates keratin 8 homeostasis in mammary
epithelial cells and in breast tumors. Mol Cancer
Res 8(6); 873-884.
|
Mouse mammary epithelial cells
|
|
47. Hong-hai Zhang, Lin Feng,
Itamar Livnat, Jeong-Kyu Hoh, Jae-Yoon Shim, Wu-Xiang
Liao, and Dong-bao Chen (2010) Estradiol-17(beta)
Stimulates Specific Receptor and Endogenous Nitric Oxide-Dependent
Dynamic Endothelial Protein S-Nitrosylation: Analysis
of Endothelial Nitrosyl-Proteome. Endocrinology
151: 3874-3887.
|
Human endothelial cell
|
|
48. Clement CC, Cannizzo ES,
Nastke M-D, Sahu R, Olszewski W, et al. (2010)
An Expanded Self-Antigen Peptidome Is Carried by the
Human Lymph As Compared to the Plasma. PLoS ONE
5(3): e9863.
|
Human plasma and lymph
|
| 49.
Zhang, L., Xiao, H., Karlan, S., Zhou, H., Gross, J.,
Elashoff, D., Akin, D., Yan, X.M., Chia, D., Karlan, B.,
Wong D.T. (2010) Discovery and preclinical validation
of salivary transcriptomic and proteomic biomarkers for
the non-invasive detection of breast cancer. PLoS ONE
5(12), e15573. |
Saliva
|
|
50 Palanisamy, V., Sharma, S.,
Deshpande, A., Zhou, H., Gimzewski, J. and Wong, D.T.
(2010) Nanostructural and Transcriptomic Analyses
of Human Saliva Derived Exosomes. PLoS ONE 5(1):
e8577.
|
Human oral keratinocytes
|
|
51. Luo, W.I, Dizin, E., Yoon,
T. and Cowan, J.A. (2010) Kinetic and structural
characterization of human mortalin. Protein Expression
and Purification 72: 75-81.
|
Purified recombinant protein (mass spec)
|
|
52. Doukhanine, E., Gavino,
C., Haines, J.D., Almazan, G. and Richard, S. (2010)
The QKI-6 RNA Binding Protein Regulates Actin-interacting
Protein-1 mRNA Stability during Oligodendrocyte Differentiation.
Mol Biol Cell 21: 3029-3040.
|
Human glioblastoma cells
|
|
53. Villar, M., Ayllón,
N., Busby, A.T., Galindo, R.C., Blouin, E.F., Kocan,
K.M., Bonzón-Kulichenko, E., Zivkovic, Z., Almazán,
C., Torina, A., Vázquez, J., Fuente, J. (2010)
Expression of heat shock and other stress response proteins
in ticks and cultured tick cells in response to Anaplasma
spp. infection and heat shock. International Journal
of Proteomics Volume 2010, Article ID 657261.
|
Tick cells
|
|
54. Loheswaran, G., Stanojcic,
M., Xu, L., Sakic, B. (2010) Autoimmunity as
a principal pathogenic factor in the refined model of
neuropsychiatric lupus. Clinical and Experimental
Neuroimmunology 1:141-152.
|
Mouse serum and cerebrospinal fluid
|
55. Kang, M-Y., Zhang, Y., Matkovich,
S.J., Diwan, A., Chishti, A.H., and Dorn, G.W. ( 2010)
Receptor-Independent Cardiac Protein Kinase C Activation
by Calpain-Mediated Truncation of Regulatory Domains.
Circulation Research 107: 903-912.
|
Mouse ventricular cells
|
|
56. Martínez-Pastor,
M., Proft, M., Pascual-Ahuir, A. (2010) Adaptive
Changes of the Yeast Mitochondrial Proteome in Response
to Salt Stress. OMICS: A Journal of Integrative Biology.
14: 541-552.
|
Yeast mitochondrial cells
|
|
57. Encinas, P., Rodriguez-Milla,
M.A., Novoa, B., Estepa, A., Figueras, A. and Coll,
J. (2010) Zebrafish fin immune responses during
high mortality infections with viral haemorrhagic septicemia
rhabdovirus. A proteomic and transcriptomic approach.
BMC Genomics 11:518
|
Zebrafish fins
|
|
58. Mellgren, R.L. (2010)
A plasma membrane wound proteome: reversible externalization
of intracellular proteins following reparable mechanical
damage. JBC 285:36597-36607.
|
Wound-associated proteins (mass spec)
|
|
59. Zhou, Q., Snider, N.T.,
Liao, J., Li, D.H., Hong, A., Ku, N., Cartwright, C.A.
& Omary, M.B. (2010) Characterization of
in vivo keratin 19 phosphorylation on tyrosine-391.
PLoS ONE 5(10):e13538
|
Keratin proteins
(mass spec)
|
|
60. Kalupahana, N.S., Claycombe,
K., Newman, S.J., Stewart, T., Siriwardhana, N., Matthan,
N., Lichtenstein A.H. and Moustaid-Moussa, N. (2010)
Eicosapentaenoic Acid Prevents and Reverses Insulin
Resistance in High-Fat Diet-Induced Obese Mice via Modulation
of Adipose Tissue Inflammation. Journal of Nutrition
140:1915-1922.
|
Cultured adipocytes
|
|
61. Sarah D. Lamore, Shuxi Qiao,
David Horn, Georg T. Wondrak (2010) Proteomic
Identification of Cathepsin B and Nucleophosmin as Novel
UVA-Targets in Human Skin Fibroblasts. Photochemistry
and Photobiology 86: 1307-1317.
|
Human dermal fibroblasts
|
| 62.
Pia Steen Petersen, David P. D. Woldbye, Andreas Nygaard
Madsen, Kristoffer L. Egerod, Chunyu Jin, Manja Lang,
Maria Rasmussen, Annette G. Beck-Sickinger, and Birgitte
Holst (2009) In Vivo Characterization of High Basal
Signaling from the Ghrelin Receptor Endocrinology
2009 150: 4920-4930. |
Cells |
| 63.
Martin, J.N., Bair, T.B., Bode, N., Dauer, W.T. and Gonzalez-Alegre,
P. (2009) Transcriptional and proteomic profiling
in a cellular model of DYT1 dystonia. Neuroscience,
164:563-572. |
Human
cell line |
|
64. Mathew, R., Karp, C.M.,
Beaudoin, B., Vuong, N., Chen, G., Chen, H.Y., Bray,
K., Reddy, A., Bhanot, G., Gelinas, C., DiPaola, R.S.,
Karantza-Wadsworth, V. and White, E. (2009) Autophagy
Suppresses Tumorigenesis through Elimination of p62.
Cell 137: 1062-1075.
|
Baby mouse kidney cells
|
|
65. Alvares, K., Dixit, S.N.,
Lux, E. and Veis, A.(2009) Echinoderm Phosphorylated
Matrix Proteins UTMP16 and UTMP19 Have Different Functions
in Sea Urchin Tooth Mineralization. JBC 284:
26149-26160.
|
Sea urchin
|
|
66. Gupta, S., Varghese, M.,
Shareef, M.M., and Ahmed M.M. (2009) Human Prostate
Cancer Cells Secrete Neuro-Protective Factors in Response
to Cryotherapy. Mol Cell Pharmacol. 1: 200-206.
|
Human prostate cancer cells
|
|
67. Kurpinski, K., Chu, J.,
Wang, D.J. and Li, S. (2009) Proteomic Profiling
of Mesenchymal Stem Cell Responses to Mechanical Strain
and TGF- 1. Cellular and Molecular Bioengineering.
2: 606-614.
|
Human mesenchymal stem cells
|
|
68. Pimkina, J., Humbey, O.,
Zilfou, J.T., Jarnik, M. and Murphy, M.E. (2009)
ARF Induces Autophagy by Virtue of Interaction with
Bcl-xl. J. Biol. Chem. 282, 14328-14336.
|
Immunoprecipitates from purified mitochondria
|
|
69. Fong, L.G. et al. (2009)
Activating the synthesis of progerin, the mutant prelamin
A in Hutchinson-Gilford progeria syndrome, with antisense
oligonucleotides. Hum Mol Genet. 18: 2462-2471.
|
Human fibroblasts
|
| 70.
Petersen, P.S., Woldbye, D.P., Madsen, A.N., Egerod, K.L.,
Jin, C., Lang, M., Rasmussen, M., Beck-Sickinger, A.G.,
Holst, B. (2009) In vivo characterization of high
Basal signaling from the ghrelin receptor. Endocrinology.
150(11):4920-4930. |
Peptide characterization (mass spec)
|
71.
Tshala-Katumbay, D., Monterroso, V., Kayton, R., Lasarev,
M., Sabri, M.M. and Spencer, P. (2009) Probing
Mechanisms of Axonopathy. Part II: Protein Targets of
2,5-Hexanedione, the Neurotoxic Metabolite of the Aliphatic
Solvent n-Hexane. Toxicological Sciences. 107(2):482-489.
|
Rat spinal cords
|
72.
Pileggi, A., Ribeiro, M.M., Hogan, A.R., Molano, R.D.,
Cobianchi, L., Ichii, H., Embury, J., Inverardi, L., Fornoni,
A., Ricordi, C. and Pastori, R.L. (2009) Impact
of Pancreatic Cold Preservation on Rat Islet Recovery
and Function. Transplantation. 87:1442-1450.
|
Rat pancreatic tissue
|
73.
Shi, T., Moulton, V.R., Lapchak, P.H., Deng, G.M., Lucca,
J.J.D. and Tsokos G.C. (2009) Ischemia-mediated
aggregation of the actin cytoskeleton is one of the major
initial events resulting in ischemia-reperfusion injury.
Am J Physiol Gastrointest Liver Physiol 296: 339-G347.
|
Mouse jejunal segments
|
74.
Caplan J.L., Zhu X., Mamillapalli P., Marathe R., Anandalakshmi
R., Dinesh-Kumar S.P. (2009) Induced ER Chaperones
Regulate a Receptor-like Kinase to Mediate Antiviral Innate
Immune Response in Plants. Cell Host Microbe. 6:457-469.
|
Plant cells
|
75.
Kang, X., Chen, W., Kim, R.H., Kang, M.K. and Park, N-H.
(2009) Regulation of the hTERT promoter activity
by MSH2, the hnRNPs K and D, and GRHL2 in human oral squamous
cell carcinoma cells. Oncogene 28: 565-574.
|
IP samples
|
76.
Tector, M., Khatri, B.O., Kozinski, K., Dennert1 K. and
Oaks, M.K. (2009) Biochemical analysis of CTLA-4
immunoreactive material from human blood. BMC Immunology
10:51.
|
Human plasma
|
| 77.
Averette, K.M., Pratt, M.R., Yang, Y., Bassilian, S.,
Whitelegge, J.P., Loo, J.A., Muir, T.W., Bradley, K.A.
(2009) Anthrax Lethal Toxin Induced Lysosomal Membrane
Permeabilization and Cytosolic Cathepsin Release Is Nlrp1b/Nalp1b-Dependent.
PLoS One. 4(11):e7913. |
Macrophage cells
|
| 78.
Saraswathy, S. and Rao, N.A. (2009) Mitochondrial
proteomics in experimental autoimmune uveitis oxidative
stress. Invest Ophthalmol Vis Sci. 50:5559-5566.
|
Mouse retinal mitochondria
|
| 79.
Hogan, A.R., Doni, M., Ribeiro, M.M., Molano, R.D., Cobianchi,
L., Molina, J., Zahr, E., Ricordi, C., Pastori, R.L. and
Pileggi, A. (2009) Ischemic preconditioning improves
islet recovery after pancreas cold preservation. Transplant
Proc. 41:354-355. |
Mouse islet cells
|
| 80.
Pileggi, A., Ribeiro, M.M., Hogan, A.R., Molano, R.D.,
Embury, J.E., Ichii, H., Cobianchi, L., Fornoni, A., Ricordi,
C. and Pastori, R.L. (2009) Effects of pancreas
cold ischemia on islet function and quality. Transplant
Proc. 41:1808-1809. |
Mouse islet cells
|
81.
Tao, G.Z., Looi, K.S., Toivola, D.M., Strnad, P., Zhou,
Q., Liao, J., Wei, Y., Habtezion, A., Omary M.B. (2009)
Keratins modulate the shape and function of hepatocyte
mitochondria: a mechanism for protection from apoptosis.
J Cell Sci. 122:3851-3855.
|
Mouse liver mitochondria
|
82.
Balestrieria, M.L., Rienzob, M., Felicea, F., Rossielloa,
R., Grimaldib, V., Milonea, L., Casamassimib, A., Servillo,
L., Farzati, B., Giovane, A. and Napoli, C. (2008)
High glucose downregulates endothelial progenitor cell
number via SIRT1. Biochimica Biophysica Acta (BBA).
1784 (6): 936-945.
|
Human endothelial progenitor cells
|
83.
Corena-McLeod Mdel P, Oliveros A, Charlesworth C, Madden
B, Liang YQ, Boules M, Shaw A, Williams K, Richelson E.
(2008) Paliperidone as a mood stabilizer: A pre-frontal
cortex synaptoneurosomal proteomics comparison with lithium
and valproic acid after chronic treatment reveals similarities
in protein expression. Brain Research. 1233:8-19.
|
Rat brain tissue
|
84.
Ho, T.D., Davis, B.M., Ritchie, J. M. and Waldor, M. K.
(2008) Type 2 Secretion Promotes Enterohemorrhagic
Escherichia coli Adherence and Intestinal Colonization.
Infection and Immunity. 76 (5): 1858-1865.
|
Enterohemorrhagic E. coli
|
| 85.
Moore J.C., Fu J., Chan Y.C., Lin D., Tran H., Tse H.F.,
Li R.A. (2008) Distinct cardiogenic preferences
of two human embryonic stem cell (hESC) lines are imprinted
in their proteomes in the pluripotent state. Biochem
Biophys Res Commun. 372(4):553-558. |
Human embryonic stem cells
|
86.
Siboo, I.R., Chaffin, D.O., Rubens, C.E. and Sullam, P.M.
(2008). Characterization of the Accessory Sec System
of Staphylococcus aureus. J. Bacteriol. 190: 6188-6196.
|
Culture media
|
| 87.
Strnad P., Tao G.Z., So P., Lau K., Schilling J., Wei
Y., Liao J. and Omary M.B. (2008) "Toxic memory"
via chaperone modification is a potential mechanism for
rapid mallory-denk body reinduction. Hepatology.
48(3):931-42. |
Mouse liver homogenates
|
88.
Tshala-Katumbay, D., Monterroso, V., Kayton, R., Lasarev,
M., Sabri, M.M. and Spencer, P. (2008) Probing
Mechanisms of Axonopathy. Part I: Protein Targets of 1,2-Diacetylbenzene,
the Neurotoxic Metabolite of Aromatic Solvent 1,2-Diethylbenzene.
Toxicological Sciences. 105(1):134-141.
|
Rat spinal cords
|
| 89.
Fuente, J., Blouin, E.F., Manzano-Roman, R., Naranjo,
V., Almazán, C., Lastra, J.M.P., Zivkovic, Z.,
Jongejan, F. and Kocan, K.M. (2007) Functional
genomic studies of tick cells in response to infection
with the cattle pathogen, Anaplasma marginale. Genomics,
90 (6): 712-722. |
Tick cells
|
| 90.
Saba, H., Batinic-Haberle, I., Munusamy, S., Mitchell,
T., Lichti, C., Megyesi, J., and MacMillan-Crow, L.E.,
(2007) Manganese Porphyrin Reduces Renal Injury
and Mitochondrial Damage during Ischemia/Reperfusion.
Free Radic Biol Med. 42(10): 1571-1578. |
Rat renal tissue
|
91.
Wong, C.C.L., Xu, T., Rai, R., Bailey, A.O., Yates, J.R.
3rd, Wolf, Y.I., Zebroski, H., and Kashina, A., (2007)
Global Analysis of Posttranslational Protein Arginylation.
PLoS Biol. 5(10): e258. 2231-2242.
|
Mouse fibroblasts
|
| 92.
Zhu, S., Si, M-L., Wu, H., and Mo, Y-Y. (2007)
MicroRNA-21 Targets the Tumor Suppressor Gene Tropomyosin
1 (TPM1). J. Biol. Chem. 282, 14328-14336. |
Mouse tumor cells
|
93.
Shen, Y., Li, L., and Liao, J., (2006) Proteomic
Technology for Plasma and Serum. Genetic Engineering
News 26(10).
|
N/A
|
| 94. Nemunaitis,
J., Senzer, N., Shen, J., Maples, P., Rao, D., Tong, A.,
Kumar, P., Kuhn, J., Zhang, Y.A., Liao, J., Khalil, I.,
Hill, C., and Gazdar,A., (2006) Clinical Study
of Personalized Therapeutics Based on Genomic/Proteomic
Profiling. Molecular Therapy 13, S21 - S22 (01
May 2006) Abstract. |
N/A
|
| |
|
|
|
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